Peptide Database

Peptide NameS-type Pyocin domain-containing protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length117 amino acids

Chemical FormulaC599H920N172O177S

DescriptionStandard

        TGQGKDVEWEDGYWLGEAANVGQGQYIPTKIADALRGKEFNRFADLQSAIWKEVAKNPELFEQFDKRNKVQIQKGNAPICLPDYQKGGRIRYEIHHITQIQHGGEVYHIDNLRINTA
    

Molecular Weight13394.82 Da

Isoelectric Point (pI)6.38

Net Charge (pH 7.0)-1.24

Net Charge (pH 7.4) -1.69

Charge Density (pH 7.0) -0.0106

GRAVY Index-0.78

Hydrophobic Moment 0.58

Boman Index-0.09

Instability Index30.58

Aliphatic Index 76.75

Aromaticity 0.1026

Extinction Coeff. Reduced 23950.00

Extinction Coeff. Oxidized 23950.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 5703.06

LogP -53.70

H-bond Donors 192.0

H-bond Acceptors 181.0

Rotatable Bonds 451.0

Heavy Atoms 949.0

Ring Count 23.0

Amide Bonds 133.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0119622 VERIFIED: NO

Provenance & Taxonomy

OrganismVibrio anguillarum [Bacterium]

FamilyPyocin/Colicin

Tax ID55601

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Hydrolase Non-hemolytic Non-ribosomal