Peptide Database

Peptide NameCyclotide mden-F

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length29 amino acids

Chemical FormulaC137H215N35O39S6

DescriptionStandard

        GLPICGETCFFGKCNTPKCTCINPICYKN
    

Molecular Weight3168.77 Da

Isoelectric Point (pI)8.33

Net Charge (pH 7.0)1.70

Net Charge (pH 7.4) 1.40

Charge Density (pH 7.0) 0.0586

GRAVY Index0.10

Hydrophobic Moment 0.22

Boman Index0.13

Instability Index18.09

Aliphatic Index 53.79

Aromaticity 0.1034

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1177.30

LogP -12.40

H-bond Donors 44.0

H-bond Acceptors 47.0

Rotatable Bonds 98.0

Heavy Atoms 217.0

Ring Count 6.0

Amide Bonds 31.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0314669 VERIFIED: NO

Provenance & Taxonomy

OrganismMelicytus dentatus [Plant]

FamilyCyclotide

Structure & Mods

Configbackbone-cyclized cyclotide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial