Peptide Database

Peptide NameType VI secretion system tube protein Hcp

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length547 amino acids

Chemical FormulaC2739H4182N740O822S9

DescriptionStandard

        MGNLIYLKITGEQQENISSGCGTYASVGNRWQENHPDEIFAFSLSNGLANTDSGINTQLLNFTKLIDKSTPLLINAINNNERLFIEIDLWRINRFGRWERYYYIQLRNASVKSIQTYVALNELDTEEIAVSYDHILCKHLIANTEFNYLALPAEYNRLFIPPLNQPTNSIIPVSNRPPPPAPHIPAVTPVYAKSCLKEKGCTDAGSREESAENFGQIAVFAQSSVVDCCGYTQPAEASAALPILGGLTQVWGEWSLGGMLSAARGVPYIGALASALYIPSAGTGSARVPGRDEFWYEEELRKKALVGGTATTRVRFFWGTDIHGKSQVYGVHTGEGTPYENVRVANMLWNDEHHRYEFTPAHDADGPLITWTPENPATGDLPTHTGSNVPPLDQPTILVTPIPDGKNEYTTPPFLVPDVADFNDYILVFPADSGIQPIYVYLSERKTSYTHRHKHYPSKNRPWEEVIKNTKSGPAKFKPEVHIESVDQDVWENGTPTTNGQNWKVKEFNNVQGAYKGKETKWVVTKESQGTIHSHPIGSNEARKLTK
    

Molecular Weight60917.56 Da

Isoelectric Point (pI)5.84

Net Charge (pH 7.0)-10.08

Net Charge (pH 7.4) -11.35

Charge Density (pH 7.0) -0.0184

GRAVY Index-0.46

Hydrophobic Moment 0.69

Boman Index0.02

Instability Index33.80

Aliphatic Index 77.39

Aromaticity 0.1005

Extinction Coeff. Reduced 107260.00

Extinction Coeff. Oxidized 107635.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0290128 VERIFIED: YES

Provenance & Taxonomy

OrganismCitrobacter sp. wls712 [Bacterium]

Tax ID2576424

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Anti-Gram-negative Non-hemolytic Non-ribosomal

TargetEscherichia coli