Peptide Database

Peptide NamePyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length564 amino acids

Chemical FormulaC2673H4232N788O815S20

DescriptionStandard

        MGYRPNIDGLGLALSSDKTTTGARLIASIPLSQVNIHGSGVIRIGDKTTPCPVCGKPGIVVEGAKEYRRSFMGVQVAVDRCEVACDCPRGSNRIIAPLGQWLGSGPSPEQVAREKHAATLAAQQTEREAQAQQQAEARERSRVFAKSCLRGEGCNDAGDAPEPHTHFAEMGIFWAAPDTDVPQHAQAAKKNPPAPEDIPKPKKRGALYRWLNGNHEERDYQAAVAVAAAAVRAQAATAGAAVLEQVAGRFATYGTWAVRGAGIAAGGVGAPVAGLLVGMMPGQLNDGEQDFIDRMRAEQMRSAPSRVRFTWESDAQGNPVPRGWHTPPGKDNVRVRKMAWDNSRQAYTFTTEEENPITIIWTPDHSGVHVPSNTGNQNRPILPNPVMVDPLPDSTGIKATTSPAPEEKSFADYILILPVADIPPIYIYLSKPPVAFLDVELYSDFKRRSRQGKYEADHMPSAAAVKAYLKANYPDMTPEDIELASQDVAAIVIPKEIHQTLSETYGGRNTAAQIERDSRNLRAALDRNLDAIKPALKDHGATDAQIEAVKAKMHKLNSEMGLYR
    

Molecular Weight61088.29 Da

Isoelectric Point (pI)6.91

Net Charge (pH 7.0)-0.35

Net Charge (pH 7.4) -1.46

Charge Density (pH 7.0) -0.0006

GRAVY Index-0.46

Hydrophobic Moment 0.66

Boman Index-0.04

Instability Index44.27

Aliphatic Index 74.34

Aromaticity 0.0603

Extinction Coeff. Reduced 66350.00

Extinction Coeff. Oxidized 66725.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0271584 VERIFIED: YES

Provenance & Taxonomy

OrganismChimaeribacter arupi [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative Antibiotic Bacteriocin Non-hemolytic Non-ribosomal

TargetEscherichia coli (Gram-negative)