Peptide Database

Peptide NamePeptide chain B in PDB 1VJ6

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length6 amino acids

Chemical FormulaC32H52N6O10

DescriptionStandard

        YLVTSV
    

Molecular Weight680.79 Da

Isoelectric Point (pI)5.52

Net Charge (pH 7.0)-0.24

Net Charge (pH 7.4) -0.45

Charge Density (pH 7.0) -0.0401

GRAVY Index1.57

Hydrophobic Moment 0.39

Boman Index0.54

Instability Index-5.82

Aliphatic Index 161.67

Aromaticity 0.1667

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 269.51

LogP -1.50

H-bond Donors 10.0

H-bond Acceptors 10.0

Rotatable Bonds 19.0

Heavy Atoms 48.0

Ring Count 1.0

Amide Bonds 5.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0029366 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1VJ6 receptor chain A

MethodProtein-peptide complex structure