Peptide Database

Peptide NamePeptide chain F in PDB 5J6H

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length8 amino acids

Chemical FormulaC36H63N9O13

DescriptionStandard

        VGITNVDL
    

Molecular Weight829.94 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.26

Net Charge (pH 7.4) -1.48

Charge Density (pH 7.0) -0.1581

GRAVY Index1.07

Hydrophobic Moment 0.09

Boman Index0.42

Instability Index-50.05

Aliphatic Index 170.00

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 367.64

LogP -3.44

H-bond Donors 12.0

H-bond Acceptors 12.0

Rotatable Bonds 26.0

Heavy Atoms 58.0

Ring Count 0.0

Amide Bonds 8.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0357386 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5J6H receptor chain A

MethodProtein-peptide complex structure