Peptide Database

Peptide NamePDI_HORVU

Function Ontology

Neurological / Signaling ▸ Signaling peptide

Standard StatusStandard

Sequence Length513 amino acids

Chemical FormulaC2577H3953N647O765S7

DescriptionStandard

        AEPAATEPLKDELAGQIVAWLKDYFDGKLTPFRKSEPIPEANNEPVKVVVADNVHDVVFKSGKAIGQHPFILVEFYAPWCGHCKSLAPEYEKAAQLLSKHDPAIVLAKVDANDASKEIKAPEDATYLEDGKIHIVGVFTEFSGPEFTNFLEVAEKLRSYYDFGDVQGYPTLYFVTPSGKKVSYEGGRTADEIVDYIRKNKETAGQAAAATEKAEFSGKDVKFLIGDIESSQGAFQYFGLKVDQAPLILIQDGDSKKFLKEHVEEKNKPLAGKYEVQGFPTLKIFRNGGKSIQEYKGPREAEGIVEYLKKQVGPHTVHANHLPRGDAAVERPVVRLFKPFDELVVDSKDFDVSALEKFIDASSTMAISKVWISLLLALAVVLSAPAARAEEAAAAEEAAAPEAVLTLHADNFDDNVLIEFYAPWCGHCKKLAPILDEAAATLQSEEDVVIAKMDATENDVPGEFPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFKSAYYGAVE
    

Molecular Weight56462.29 Da

Isoelectric Point (pI)5.03

Net Charge (pH 7.0)-23.09

Net Charge (pH 7.4) -24.14

Charge Density (pH 7.0) -0.0450

GRAVY Index-0.23

Hydrophobic Moment 0.84

Boman Index0.07

Instability Index33.77

Aliphatic Index 84.48

Aromaticity 0.1053

Extinction Coeff. Reduced 48820.00

Extinction Coeff. Oxidized 49070.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0419890 VERIFIED: YES

Provenance & Taxonomy

OrganismHordeum vulgare [Plant]

Tax ID4513

Structure & Mods

Configdisulfide-constrained cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Disulfidedisulfide bond reported, sites not specified

Other ModsGlycosylation reported

Bio-Activity Profile

Function

Signaling