Peptide Database

Peptide NameLysozyme (EC 3.2.1.17)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Enzyme / Catalytic activity ▸ Hydrolase

Enzyme / Catalytic activity ▸ Hydrolase ▸ Glycosidase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length198 amino acids

Chemical FormulaC930H1530N280O272S11

DescriptionStandard

        MANDKLIVTPRRGLAAIVGLATASLLLVNIPKEESGRTVKVEMAPDGAATVQHISGRQYLRAYLDIVGVPTACDGLTSYHGRKIKIADQFTEAQCTAMLEEELVVHAKGVMQCTPGLALTYPRRDHARFAAVSLAYNVGVANWCSSTARRMFNASRITAGCDALLPWNKVTKNGKKVVSNGLAGRRSRERAICLKDAA
    

Molecular Weight21338.52 Da

Isoelectric Point (pI)9.66

Net Charge (pH 7.0)10.80

Net Charge (pH 7.4) 10.26

Charge Density (pH 7.0) 0.0546

GRAVY Index-0.04

Hydrophobic Moment 0.69

Boman Index0.01

Instability Index40.11

Aliphatic Index 92.22

Aromaticity 0.0505

Extinction Coeff. Reduced 18450.00

Extinction Coeff. Oxidized 18825.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8880.82

LogP -116.24

H-bond Donors 320.0

H-bond Acceptors 298.0

Rotatable Bonds 710.0

Heavy Atoms 1493.0

Ring Count 23.0

Amide Bonds 210.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0334163 VERIFIED: NO

Provenance & Taxonomy

OrganismSphingobium yanoikuyae [Bacterium]

FamilyLysozyme

Tax ID13690

Structure & Mods

Configlinear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Glycosidase Hydrolase Non-hemolytic

MethodQualitative functional evidence