Peptide Database

Peptide NameCyclotide vitri peptide 12

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length30 amino acids

Chemical FormulaC134H198N38O46S6

DescriptionStandard

        GVTCRETCYSQDCYSAWAGCKCNDGACFIN
    

Molecular Weight3269.62 Da

Isoelectric Point (pI)4.56

Net Charge (pH 7.0)-1.30

Net Charge (pH 7.4) -1.60

Charge Density (pH 7.0) -0.0432

GRAVY Index-0.17

Hydrophobic Moment 0.25

Boman Index0.02

Instability Index26.48

Aliphatic Index 32.67

Aromaticity 0.1333

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8855.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1373.48

LogP -18.48

H-bond Donors 54.0

H-bond Acceptors 51.0

Rotatable Bonds 102.0

Heavy Atoms 224.0

Ring Count 5.0

Amide Bonds 32.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0346343 VERIFIED: NO

Provenance & Taxonomy

OrganismViola tricolor [Plant]

FamilyCyclotide

Structure & Mods

Confighead-to-tail cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial

RECORD: Rec_0403699 VERIFIED: YES

Provenance & Taxonomy

OrganismViola tricolor [Plant]

FamilyCyclotide

Tax ID214053

Structure & Mods

Confighead-to-tail cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Disulfidemultiple disulfide bonds reported, sites not specified

Bio-Activity Profile

Function

Antimicrobial