Peptide Database

Peptide NamePeptide chain C in PDB 4D0D

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length8 amino acids

Chemical FormulaC43H71N9O10

DescriptionStandard

        VIFPAKSL
    

Molecular Weight874.08 Da

Isoelectric Point (pI)8.72

Net Charge (pH 7.0)0.73

Net Charge (pH 7.4) 0.52

Charge Density (pH 7.0) 0.0916

GRAVY Index1.35

Hydrophobic Moment 0.31

Boman Index0.47

Instability Index56.90

Aliphatic Index 146.25

Aromaticity 0.1250

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 304.48

LogP -0.57

H-bond Donors 10.0

H-bond Acceptors 11.0

Rotatable Bonds 26.0

Heavy Atoms 62.0

Ring Count 2.0

Amide Bonds 7.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0345371 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 4D0D receptor chain A

MethodProtein-peptide complex structure