Peptide Database

Peptide NamePeptide chain P in PDB 5D7F

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length10 amino acids

Chemical FormulaC50H78N14O14

DescriptionStandard

        GPWDSVARVL
    

Molecular Weight1099.24 Da

Isoelectric Point (pI)5.84

Net Charge (pH 7.0)-0.24

Net Charge (pH 7.4) -0.44

Charge Density (pH 7.0) -0.0239

GRAVY Index0.23

Hydrophobic Moment 0.59

Boman Index0.16

Instability Index25.38

Aliphatic Index 107.00

Aromaticity 0.1000

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 451.65

LogP -3.27

H-bond Donors 16.0

H-bond Acceptors 14.0

Rotatable Bonds 31.0

Heavy Atoms 78.0

Ring Count 3.0

Amide Bonds 9.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0412095 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5D7F receptor chain A

MethodProtein-peptide complex structure