Peptide Database

Peptide NameRAG1_ORYSJ

Function Ontology

Neurological / Signaling ▸ Signaling peptide

Standard StatusStandard

Sequence Length163 amino acids

Chemical FormulaC762H1192N226O223S15

DescriptionStandard

        GIYRELGATEAGHPMAEVFPGCRRGDLERAAASLPAFCNVDIPNGPGGVCMASNKVVFSVLLLVVLSVLAAAMATMADHHQVYSPGEQCRPGISYPTYSLPQCRTLVRRQCVGRGAASAADEQVWQDCCRQLAAVDDGWCRCGALDHMLSYWLGYPRTPRTGH
    

Molecular Weight17567.97 Da

Isoelectric Point (pI)7.07

Net Charge (pH 7.0)0.12

Net Charge (pH 7.4) -0.51

Charge Density (pH 7.0) 0.0007

GRAVY Index-0.02

Hydrophobic Moment 0.63

Boman Index0.07

Instability Index27.46

Aliphatic Index 77.85

Aromaticity 0.0736

Extinction Coeff. Reduced 25440.00

Extinction Coeff. Oxidized 26065.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 7080.25

LogP -75.31

H-bond Donors 256.0

H-bond Acceptors 243.0

Rotatable Bonds 553.0

Heavy Atoms 1226.0

Ring Count 31.0

Amide Bonds 172.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0350744 VERIFIED: YES

Provenance & Taxonomy

OrganismOryza sativa subsp. Japonica [Plant]

Structure & Mods

Configdisulfide-constrained cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Disulfidedisulfide bond reported, sites not specified

Bio-Activity Profile

Function

Signaling