Peptide Database

Peptide NameVv-AMP1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC116H186N42O42S4

DescriptionStandard

        RTCESQSHRFKGTCVSASNCANVCHNE
    

Molecular Weight2969.23 Da

Isoelectric Point (pI)7.91

Net Charge (pH 7.0)0.90

Net Charge (pH 7.4) 0.53

Charge Density (pH 7.0) 0.0335

GRAVY Index-0.76

Hydrophobic Moment 0.45

Boman Index-0.25

Instability Index45.30

Aliphatic Index 28.89

Aromaticity 0.0370

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1395.44

LogP -23.11

H-bond Donors 53.0

H-bond Acceptors 49.0

Rotatable Bonds 98.0

Heavy Atoms 204.0

Ring Count 3.0

Amide Bonds 30.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0126932 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis thaliana [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)