Peptide Database

Peptide NameVv-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC124H205N47O42S4

DescriptionStandard

        RICESQSHRYRGPCVRESNCANVCRTE
    

Molecular Weight3154.50 Da

Isoelectric Point (pI)8.55

Net Charge (pH 7.0)1.82

Net Charge (pH 7.4) 1.50

Charge Density (pH 7.0) 0.0674

GRAVY Index-1.05

Hydrophobic Moment 0.42

Boman Index-0.45

Instability Index35.59

Aliphatic Index 39.63

Aromaticity 0.0370

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1740.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1491.63

LogP -21.56

H-bond Donors 58.0

H-bond Acceptors 49.0

Rotatable Bonds 104.0

Heavy Atoms 217.0

Ring Count 3.0

Amide Bonds 29.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0412958 VERIFIED: YES

Provenance & Taxonomy

OrganismTrema andersonii [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)