Peptide Database

Peptide NamePaenicidin A

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive

Standard StatusStandard

Sequence Length36 amino acids

Chemical FormulaC139H234N42O50S6

DescriptionStandard

        VLSIVACSSGCGSGKTAASCVETCGNRCFTNVGSLC
    

Molecular Weight3485.99 Da

Isoelectric Point (pI)7.75

Net Charge (pH 7.0)0.68

Net Charge (pH 7.4) 0.37

Charge Density (pH 7.0) 0.0188

GRAVY Index0.68

Hydrophobic Moment 0.54

Boman Index0.21

Instability Index20.63

Aliphatic Index 73.06

Aromaticity 0.0278

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 375.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1475.29

LogP -24.73

H-bond Donors 59.0

H-bond Acceptors 57.0

Rotatable Bonds 113.0

Heavy Atoms 237.0

Ring Count 1.0

Amide Bonds 37.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0323981 VERIFIED: YES

Provenance & Taxonomy

OrganismPaenibacillus polymyxa [Bacterium]

FamilyBacteriocin

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial Anti-Gram-positive

TargetGram-positive

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