Peptide Database

Peptide NamepdBD-2

Function Ontology

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Standard StatusStandard

Sequence Length36 amino acids

Chemical FormulaC192H279N61O53S5

DescriptionStandard

        DSEMQYWTCGYRGLCRRFCYAQEYTVGHHGCPRRYR
    

Molecular Weight4449.97 Da

Isoelectric Point (pI)8.87

Net Charge (pH 7.0)2.90

Net Charge (pH 7.4) 2.52

Charge Density (pH 7.0) 0.0805

GRAVY Index-1.09

Hydrophobic Moment 0.62

Boman Index-0.29

Instability Index32.38

Aliphatic Index 21.67

Aromaticity 0.1944

Extinction Coeff. Reduced 12950.00

Extinction Coeff. Oxidized 13200.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1877.50

LogP -18.70

H-bond Donors 74.0

H-bond Acceptors 63.0

Rotatable Bonds 139.0

Heavy Atoms 311.0

Ring Count 11.0

Amide Bonds 37.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0108788 VERIFIED: YES

Provenance & Taxonomy

OrganismDichotomyctere nigroviridis [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)