Peptide Database

Peptide NameApl_AvBD-2

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Standard StatusStandard

Sequence Length41 amino acids

Chemical FormulaC205H312N60O50S7

DescriptionStandard

        PGFSLPRRDMLFCRHGSCYFGQCPIHLVKVGSCFGFRSCCK
    

Molecular Weight4641.50 Da

Isoelectric Point (pI)9.21

Net Charge (pH 7.0)5.07

Net Charge (pH 7.4) 4.82

Charge Density (pH 7.0) 0.1237

GRAVY Index0.11

Hydrophobic Moment 0.44

Boman Index0.04

Instability Index64.35

Aliphatic Index 52.20

Aromaticity 0.1463

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1734.29

LogP -16.67

H-bond Donors 69.0

H-bond Acceptors 64.0

Rotatable Bonds 147.0

Heavy Atoms 322.0

Ring Count 11.0

Amide Bonds 41.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0212008 VERIFIED: YES

Provenance & Taxonomy

OrganismApaloderma vittatum [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)