Peptide Database

Peptide NameSD2

Function Ontology

—

Standard StatusStandard

Sequence Length34 amino acids

Chemical FormulaC148H246N46O54S5

DescriptionStandard

        GSKMAEARTCESQTHKFKGTCLSETNCANVCKTE
    

Molecular Weight3694.14 Da

Isoelectric Point (pI)7.88

Net Charge (pH 7.0)0.82

Net Charge (pH 7.4) 0.49

Charge Density (pH 7.0) 0.0241

GRAVY Index-0.78

Hydrophobic Moment 0.46

Boman Index-0.21

Instability Index43.53

Aliphatic Index 28.82

Aromaticity 0.0294

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1658.59

LogP -24.76

H-bond Donors 62.0

H-bond Acceptors 61.0

Rotatable Bonds 128.0

Heavy Atoms 253.0

Ring Count 2.0

Amide Bonds 36.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0418554 VERIFIED: YES

Provenance & Taxonomy

OrganismJatropha curcas [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)