Peptide Database

Peptide NamePeptide chain B in PDB 5L0S

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length39 amino acids

Chemical FormulaC173H266N52O60S6

DescriptionStandard

        GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHK
    

Molecular Weight4226.67 Da

Isoelectric Point (pI)5.48

Net Charge (pH 7.0)-1.21

Net Charge (pH 7.4) -1.56

Charge Density (pH 7.0) -0.0310

GRAVY Index-0.62

Hydrophobic Moment 0.31

Boman Index-0.09

Instability Index70.76

Aliphatic Index 35.13

Aromaticity 0.0769

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1823.28

LogP -26.12

H-bond Donors 66.0

H-bond Acceptors 66.0

Rotatable Bonds 138.0

Heavy Atoms 291.0

Ring Count 6.0

Amide Bonds 44.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0182655 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5L0S receptor chain A

MethodProtein-peptide complex structure