Peptide Database

Peptide NameCyclotide vitri peptide 24a

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length33 amino acids

Chemical FormulaC148H215N39O49S6

DescriptionStandard

        GGTIFNCGESCFQGTCYTKGCACGDWKLCYGEN
    

Molecular Weight3516.91 Da

Isoelectric Point (pI)4.68

Net Charge (pH 7.0)-1.30

Net Charge (pH 7.4) -1.60

Charge Density (pH 7.0) -0.0393

GRAVY Index-0.22

Hydrophobic Moment 0.45

Boman Index0.11

Instability Index21.59

Aliphatic Index 26.67

Aromaticity 0.1515

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8855.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1424.90

LogP -18.26

H-bond Donors 55.0

H-bond Acceptors 54.0

Rotatable Bonds 112.0

Heavy Atoms 242.0

Ring Count 6.0

Amide Bonds 35.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0223490 VERIFIED: NO

Provenance & Taxonomy

OrganismViola tricolor [Plant]

FamilyCyclotide

Structure & Mods

Confighead-to-tail cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial

RECORD: Rec_0266886 VERIFIED: YES

Provenance & Taxonomy

OrganismViola tricolor [Plant]

FamilyCyclotide

Tax ID214053

Structure & Mods

Confighead-to-tail cyclic peptide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

DisulfideCysteine-rich scaffold consistent with multiple disulfide bonds in the annotated family

Bio-Activity Profile

Function

Antimicrobial