Peptide Database

Peptide NameSyn-xiamencin-1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Standard StatusStandard

Sequence Length25 amino acids

Chemical FormulaC136H224N40O33

DescriptionStandard

        AGRQALTLYLKEELRKRGKKAFIAW
    

Molecular Weight2947.48 Da

Isoelectric Point (pI)10.55

Net Charge (pH 7.0)4.80

Net Charge (pH 7.4) 4.60

Charge Density (pH 7.0) 0.1919

GRAVY Index-0.54

Hydrophobic Moment 0.54

Boman Index-0.19

Instability Index40.90

Aliphatic Index 94.00

Aromaticity 0.1200

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 6990.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1225.44

LogP -7.80

H-bond Donors 45.0

H-bond Acceptors 38.0

Rotatable Bonds 103.0

Heavy Atoms 209.0

Ring Count 4.0

Amide Bonds 25.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0154477 VERIFIED: YES

Provenance & Taxonomy

Organismsynthetic construct [Synthetic]

Tax ID32630

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial

TargetEscherichia coli BL21

Activity32 μM

MethodMIC