Peptide Database

Peptide NameCarnobacteriocin BM1

Function Ontology

—

Standard StatusStandard

Sequence Length18 amino acids

Chemical FormulaC94H135N25O27S2

DescriptionStandard

        ATYYGNGVYCNKQKCWVN
    

Molecular Weight2111.36 Da

Isoelectric Point (pI)8.79

Net Charge (pH 7.0)1.77

Net Charge (pH 7.4) 1.55

Charge Density (pH 7.0) 0.0984

GRAVY Index-0.72

Hydrophobic Moment 0.19

Boman Index-0.02

Instability Index29.06

Aliphatic Index 37.78

Aromaticity 0.2222

Extinction Coeff. Reduced 9970.00

Extinction Coeff. Oxidized 10095.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 879.13

LogP -8.81

H-bond Donors 32.0

H-bond Acceptors 31.0

Rotatable Bonds 65.0

Heavy Atoms 148.0

Ring Count 5.0

Amide Bonds 21.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0330546 VERIFIED: YES

Provenance & Taxonomy

OrganismEnterococcus faecalis [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)