Peptide Database

Peptide NameCyclotide Vaby D

Function Ontology

Anticancer

Antimicrobial

Standard StatusStandard

Sequence Length29 amino acids

Chemical FormulaC122H187N35O41S6

DescriptionStandard

        GETCFGGTCNTPGCTCDWPVCTRNGLPVC
    

Molecular Weight2992.39 Da

Isoelectric Point (pI)4.37

Net Charge (pH 7.0)-1.30

Net Charge (pH 7.4) -1.59

Charge Density (pH 7.0) -0.0447

GRAVY Index0.01

Hydrophobic Moment 0.31

Boman Index0.13

Instability Index53.58

Aliphatic Index 33.45

Aromaticity 0.0690

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5875.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1191.37

LogP -17.19

H-bond Donors 46.0

H-bond Acceptors 46.0

Rotatable Bonds 86.0

Heavy Atoms 204.0

Ring Count 6.0

Amide Bonds 30.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0411367 VERIFIED: NO

Provenance & Taxonomy

OrganismViola abyssinica [Plant]

FamilyCyclotide

Structure & Mods

Configbackbone-cyclized peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anticancer