Peptide Database

Peptide NameAMY1_ORYSJ

Function Ontology

Neurological / Signaling ▸ Signaling peptide

Standard StatusStandard

Sequence Length434 amino acids

Chemical FormulaC2188H3286N586O638S14

DescriptionStandard

        APGMIGWWPAKATTFVDNHDTGSTQHLWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGLKEEIERLVSIRNRQGIHPASELRIMEADSDLYLAEIDGKIGFDAWRLDFAKGYSADMAKIYIDATEPSFAVAEIWTSMANGGDGKPNYDLKSLIEAFHGKGVQVIADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGMQVLNTMVNKHFLSLSVLIVLLGLSSNLTAGQVLFQGFNWESWKENGGWYNFLMGKVDDIAAAGITHVWLPPPSHSVGEQGYMPGRLYDLDASKYGNEAQPHMICRDDPYGDGTGNPDTGADFAAAPDIDHLNKRVQRELIGWLDWLKMDQNAHRQELVNWVDRVGGANSNATAFDFTTKGILNVAVEGELWRLRGEDGKVITKIGPRYDVEHLIPEGFQVVAHGDGYAIWEKI
    

Molecular Weight48455.95 Da

Isoelectric Point (pI)5.06

Net Charge (pH 7.0)-20.77

Net Charge (pH 7.4) -21.93

Charge Density (pH 7.0) -0.0479

GRAVY Index-0.31

Hydrophobic Moment 0.72

Boman Index0.08

Instability Index23.92

Aliphatic Index 81.38

Aromaticity 0.1129

Extinction Coeff. Reduced 110350.00

Extinction Coeff. Oxidized 110475.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0204086 VERIFIED: YES

Provenance & Taxonomy

OrganismOryza sativa subsp. Japonica [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralityall-D amino-acid peptide [D]

Other ModsGlycosylation reported

Bio-Activity Profile

Function

Signaling