Peptide Database

Peptide NamePyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length442 amino acids

Chemical FormulaC2072H3267N575O635S10

DescriptionStandard

        MSGYVPNPPKGYRNSGVEPADIHAQRWAEYNDLTPKEDTKPNAVGCVFAKSCDLPDGVIDHKKPAGFIPVEKVANYGEIAILGGRETDADGNIPLKKISGSALPTAIGTLVLGGAAVAASTSCGGLCTAGAAGVATETAAVTGAGAGTGVVTAGVVAGFLGGMVAMLWSSSLGDSSLYTEDQLRSLKQARTRVRLHIEQQADGTLKGYGYNTQKRGEWEMIPVVGFVVQDAKQVADLGDGVTLIWTPAVDPSSTSGIPPLEGAPQAPQIWIYPPTEQADNIIVNPIYPPEYKDFILVFPAGSGVPPLYIVMNVRKTPGTVTGQGEDVIGIWLIGASSGVGVPIPKEVADALRGRDFKSFDKFRSALWEAVSESAAADQFIKQNVSRMRTGRAPRVREADSVGGRLSYELHHLEKVSEGGGVYDVDNLRVNTPRNHIDLHRNE
    

Molecular Weight46713.23 Da

Isoelectric Point (pI)5.52

Net Charge (pH 7.0)-7.86

Net Charge (pH 7.4) -8.60

Charge Density (pH 7.0) -0.0178

GRAVY Index-0.16

Hydrophobic Moment 0.69

Boman Index0.08

Instability Index36.29

Aliphatic Index 85.38

Aromaticity 0.0679

Extinction Coeff. Reduced 57870.00

Extinction Coeff. Oxidized 58120.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0116964 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas frederiksbergensis [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal