Peptide Database

Peptide NamePeptide chain D in PDB 3PA7

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length4 amino acids

Chemical FormulaC23H34N4O5

DescriptionStandard

        ALPF
    

Molecular Weight446.54 Da

Isoelectric Point (pI)5.57

Net Charge (pH 7.0)-0.20

Net Charge (pH 7.4) -0.39

Charge Density (pH 7.0) -0.0510

GRAVY Index1.70

Hydrophobic Moment 0.23

Boman Index0.75

Instability Index103.80

Aliphatic Index 122.50

Aromaticity 0.2500

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 141.83

LogP 0.67

H-bond Donors 4.0

H-bond Acceptors 5.0

Rotatable Bonds 10.0

Heavy Atoms 32.0

Ring Count 2.0

Amide Bonds 3.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0424352 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3PA7 receptor chain A

MethodProtein-peptide complex structure