Peptide Database

Peptide NameTk-AMP-X2

Function Ontology

—

Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC140H226N52O44S6

DescriptionStandard

        TDDRCERMCQHYHDRREKKQCMKGCRYG
    

Molecular Weight3534.00 Da

Isoelectric Point (pI)8.86

Net Charge (pH 7.0)2.54

Net Charge (pH 7.4) 2.17

Charge Density (pH 7.0) 0.0906

GRAVY Index-1.98

Hydrophobic Moment 0.56

Boman Index-0.71

Instability Index50.76

Aliphatic Index 0.00

Aromaticity 0.0714

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3230.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1627.31

LogP -19.43

H-bond Donors 63.0

H-bond Acceptors 55.0

Rotatable Bonds 124.0

Heavy Atoms 242.0

Ring Count 4.0

Amide Bonds 29.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0024770 VERIFIED: YES

Provenance & Taxonomy

OrganismTriticum kiharae [Plant]

Structure & Mods

ConfigDNA-encoded linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)