Peptide Database

Peptide NamePeptide chain C in PDB 4PGD

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length9 amino acids

Chemical FormulaC49H62N10O12

DescriptionStandard

        FAPGNYPAF
    

Molecular Weight983.08 Da

Isoelectric Point (pI)5.52

Net Charge (pH 7.0)-0.24

Net Charge (pH 7.4) -0.45

Charge Density (pH 7.0) -0.0268

GRAVY Index0.09

Hydrophobic Moment 0.15

Boman Index0.42

Instability Index55.97

Aliphatic Index 22.22

Aromaticity 0.3333

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 341.86

LogP -1.73

H-bond Donors 10.0

H-bond Acceptors 12.0

Rotatable Bonds 23.0

Heavy Atoms 71.0

Ring Count 5.0

Amide Bonds 9.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0217091 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 4PGD receptor chain A

MethodProtein-peptide complex structure