Peptide Database

Peptide NameCycloviolacin VY1

Function Ontology

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Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC123H199N35O38S6

DescriptionStandard

        CGESCVWIPCISAAIGCSCKSKVCYRNS
    

Molecular Weight2968.50 Da

Isoelectric Point (pI)8.33

Net Charge (pH 7.0)1.70

Net Charge (pH 7.4) 1.40

Charge Density (pH 7.0) 0.0607

GRAVY Index0.45

Hydrophobic Moment 0.28

Boman Index0.12

Instability Index26.04

Aliphatic Index 69.64

Aromaticity 0.0714

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7365.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1171.73

LogP -14.78

H-bond Donors 48.0

H-bond Acceptors 46.0

Rotatable Bonds 94.0

Heavy Atoms 202.0

Ring Count 4.0

Amide Bonds 28.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0172915 VERIFIED: YES

Provenance & Taxonomy

OrganismViola odorata [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)