Peptide Database

Peptide NameAvidumicin

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length59 amino acids

Chemical FormulaC252H420N68O70S2

DescriptionStandard

        IAGMFGLSTSAASQIVNAVSVGGAALSIAMAVASGGIAAAAVATAKWAIKKWGKKVAIA
    

Molecular Weight5586.57 Da

Isoelectric Point (pI)10.60

Net Charge (pH 7.0)4.76

Net Charge (pH 7.4) 4.54

Charge Density (pH 7.0) 0.0806

GRAVY Index1.04

Hydrophobic Moment 0.55

Boman Index0.43

Instability Index4.99

Aliphatic Index 112.88

Aromaticity 0.0508

Extinction Coeff. Reduced 11000.00

Extinction Coeff. Oxidized 11000.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2160.82

LogP -22.70

H-bond Donors 77.0

H-bond Acceptors 77.0

Rotatable Bonds 184.0

Heavy Atoms 392.0

Ring Count 5.0

Amide Bonds 60.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0252657 VERIFIED: YES

Provenance & Taxonomy

Organismsynthetic construct based on Cutibacterium avidum [Synthetic]

FamilyBacteriocin

Tax ID32630

Structure & Mods

Configsynthetic linear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial

Targetshowed a weak activity

Activity113 μM

MethodMIC