Peptide Database

Peptide NamePeptide chain B in PDB 1PD0

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length10 amino acids

Chemical FormulaC51H73N13O18S

DescriptionStandard

        TYNNSNPFMT
    

Molecular Weight1188.27 Da

Isoelectric Point (pI)5.18

Net Charge (pH 7.0)-0.60

Net Charge (pH 7.4) -0.79

Charge Density (pH 7.0) -0.0603

GRAVY Index-1.09

Hydrophobic Moment 0.20

Boman Index-0.04

Instability Index22.50

Aliphatic Index 0.00

Aromaticity 0.2000

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 526.62

LogP -7.41

H-bond Donors 17.0

H-bond Acceptors 19.0

Rotatable Bonds 34.0

Heavy Atoms 83.0

Ring Count 3.0

Amide Bonds 12.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0092381 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1PD0 receptor chain A

MethodProtein-peptide complex structure