Peptide Database

Peptide NameHymenochirin-3B

Function Ontology

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Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC139H234N36O38

DescriptionStandard

        LKIPGFVRDTLKKVAKEIFSAVTGAVTQ
    

Molecular Weight3017.56 Da

Isoelectric Point (pI)10.00

Net Charge (pH 7.0)2.76

Net Charge (pH 7.4) 2.55

Charge Density (pH 7.0) 0.0986

GRAVY Index0.30

Hydrophobic Moment 0.71

Boman Index0.11

Instability Index-16.82

Aliphatic Index 107.86

Aromaticity 0.0714

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1204.82

LogP -9.87

H-bond Donors 42.0

H-bond Acceptors 41.0

Rotatable Bonds 102.0

Heavy Atoms 213.0

Ring Count 3.0

Amide Bonds 28.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0313164 VERIFIED: YES

Provenance & Taxonomy

OrganismHymenochirus boettgeri [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)