Peptide Database

Peptide NamePeptide chain K in PDB 5IY5

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length49 amino acids

Chemical FormulaC250H369N65O68S2

DescriptionStandard

        APDFHDKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWR
    

Molecular Weight5437.13 Da

Isoelectric Point (pI)6.79

Net Charge (pH 7.0)-0.12

Net Charge (pH 7.4) -0.39

Charge Density (pH 7.0) -0.0025

GRAVY Index-0.06

Hydrophobic Moment 0.64

Boman Index0.16

Instability Index27.77

Aliphatic Index 71.63

Aromaticity 0.1429

Extinction Coeff. Reduced 19480.00

Extinction Coeff. Oxidized 19480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2096.93

LogP -16.78

H-bond Donors 73.0

H-bond Acceptors 71.0

Rotatable Bonds 163.0

Heavy Atoms 385.0

Ring Count 15.0

Amide Bonds 51.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0269860 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5IY5 receptor chain D

MethodProtein-peptide complex structure