Peptide Database

Peptide NameCyclotide mden-L

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length31 amino acids

Chemical FormulaC137H224N38O42S6

DescriptionStandard

        GSIPCGESCVYIPCISAVLGCSCKNKVCYRN
    

Molecular Weight3267.86 Da

Isoelectric Point (pI)8.33

Net Charge (pH 7.0)1.70

Net Charge (pH 7.4) 1.40

Charge Density (pH 7.0) 0.0548

GRAVY Index0.44

Hydrophobic Moment 0.28

Boman Index0.14

Instability Index26.33

Aliphatic Index 81.61

Aromaticity 0.0645

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1277.54

LogP -15.40

H-bond Donors 50.0

H-bond Acceptors 50.0

Rotatable Bonds 103.0

Heavy Atoms 223.0

Ring Count 4.0

Amide Bonds 32.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0175095 VERIFIED: NO

Provenance & Taxonomy

OrganismMelicytus dentatus [Plant]

FamilyCyclotide

Structure & Mods

Configbackbone-cyclized cyclotide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial