Peptide Database

Peptide NamePeptide chain B in PDB 5V3N

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length33 amino acids

Chemical FormulaC164H259N51O49S

DescriptionStandard

        NAPYFGRPSLKTRAKQFEGVSSKNCRRIEAFSD
    

Molecular Weight3761.19 Da

Isoelectric Point (pI)10.02

Net Charge (pH 7.0)3.76

Net Charge (pH 7.4) 3.53

Charge Density (pH 7.0) 0.1138

GRAVY Index-0.94

Hydrophobic Moment 0.51

Boman Index-0.29

Instability Index65.15

Aliphatic Index 41.52

Aromaticity 0.1212

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1665.15

LogP -20.39

H-bond Donors 60.0

H-bond Acceptors 54.0

Rotatable Bonds 125.0

Heavy Atoms 265.0

Ring Count 6.0

Amide Bonds 35.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0040411 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5V3N receptor chain A

MethodProtein-peptide complex structure