Peptide Database

Peptide NameGNCP-1

Function Ontology

—

Standard StatusStandard

Sequence Length17 amino acids

Chemical FormulaC93H138N28O22S3

DescriptionStandard

        RRYGTCIYQGRLWAFCC
    

Molecular Weight2096.46 Da

Isoelectric Point (pI)9.16

Net Charge (pH 7.0)2.73

Net Charge (pH 7.4) 2.48

Charge Density (pH 7.0) 0.1605

GRAVY Index-0.09

Hydrophobic Moment 0.42

Boman Index-0.06

Instability Index33.77

Aliphatic Index 51.76

Aromaticity 0.2353

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8605.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 834.19

LogP -6.38

H-bond Donors 35.0

H-bond Acceptors 28.0

Rotatable Bonds 64.0

Heavy Atoms 146.0

Ring Count 5.0

Amide Bonds 17.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0350439 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)