Peptide Database

Peptide NameBnPRP1

Function Ontology

—

Standard StatusStandard

Sequence Length37 amino acids

Chemical FormulaC176H258N46O53S2

DescriptionStandard

        PPTQNPYGQPMAPPTQNPYGQPMAPPTQNPYGQPVAP
    

Molecular Weight3930.34 Da

Isoelectric Point (pI)5.94

Net Charge (pH 7.0)-0.04

Net Charge (pH 7.4) -0.11

Charge Density (pH 7.0) -0.0012

GRAVY Index-1.25

Hydrophobic Moment 0.25

Boman Index0.01

Instability Index49.05

Aliphatic Index 15.95

Aromaticity 0.0811

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4470.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1500.64

LogP -18.33

H-bond Donors 41.0

H-bond Acceptors 55.0

Rotatable Bonds 101.0

Heavy Atoms 277.0

Ring Count 16.0

Amide Bonds 45.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0404977 VERIFIED: YES

Provenance & Taxonomy

OrganismBrassica rapa [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)