Peptide Database

Peptide NamePeptide chain 3 in PDB 5NIF

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length6 amino acids

Chemical FormulaC41H52N10O10

DescriptionStandard

        WRSYYA
    

Molecular Weight844.91 Da

Isoelectric Point (pI)8.59

Net Charge (pH 7.0)0.76

Net Charge (pH 7.4) 0.55

Charge Density (pH 7.0) 0.1263

GRAVY Index-1.17

Hydrophobic Moment 0.41

Boman Index-0.13

Instability Index141.60

Aliphatic Index 16.67

Aromaticity 0.5000

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 347.20

LogP -1.28

H-bond Donors 14.0

H-bond Acceptors 11.0

Rotatable Bonds 22.0

Heavy Atoms 61.0

Ring Count 4.0

Amide Bonds 5.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0216797 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5NIF receptor chain T

MethodProtein-peptide complex structure