Peptide Database

Peptide NameVv-AMP1

Function Ontology

—

Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC119H200N38O40S4

DescriptionStandard

        RTCESQSHKFKGVCVSKSNCAGICKTE
    

Molecular Weight2931.35 Da

Isoelectric Point (pI)8.89

Net Charge (pH 7.0)2.81

Net Charge (pH 7.4) 2.49

Charge Density (pH 7.0) 0.1042

GRAVY Index-0.56

Hydrophobic Moment 0.42

Boman Index-0.20

Instability Index40.36

Aliphatic Index 39.63

Aromaticity 0.0370

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1296.74

LogP -19.05

H-bond Donors 50.0

H-bond Acceptors 48.0

Rotatable Bonds 102.0

Heavy Atoms 201.0

Ring Count 2.0

Amide Bonds 28.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0424509 VERIFIED: YES

Provenance & Taxonomy

OrganismZiziphus jujuba [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)