Peptide Database

Peptide NamePeptide chain A in PDB 1RTF

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length8 amino acids

Chemical FormulaC38H62N12O13S

DescriptionStandard

        TCGLRQYS
    

Molecular Weight927.04 Da

Isoelectric Point (pI)7.89

Net Charge (pH 7.0)0.39

Net Charge (pH 7.4) 0.18

Charge Density (pH 7.0) 0.0484

GRAVY Index-0.61

Hydrophobic Moment 0.44

Boman Index-0.19

Instability Index47.48

Aliphatic Index 48.75

Aromaticity 0.1250

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 432.70

LogP -5.75

H-bond Donors 17.0

H-bond Acceptors 15.0

Rotatable Bonds 29.0

Heavy Atoms 64.0

Ring Count 1.0

Amide Bonds 8.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0123905 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1RTF receptor chain B

MethodProtein-peptide complex structure