Peptide Database

Peptide NameCathelicidin 1

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length193 amino acids

Chemical FormulaC874H1442N280O274S14

DescriptionStandard

        MTTQMRLLCFAAVTLLAEAQMIPDPFIFPLKNFRPLLDQLQYETVYPEGVDLSTMSVRKMTFPAQELDCSQVNTSMPGQQCPLKGNGKIMNCNVTLSYINQDADIQGFQLNCDAAIKEATLTRVRRSGSGRGSGKGGCGGSRGSRGSRCSKGSSRSRGSKGSSRPRGSRGGRLGRFSIIAAKGNRNNGGTRTA
    

Molecular Weight20705.42 Da

Isoelectric Point (pI)10.30

Net Charge (pH 7.0)15.44

Net Charge (pH 7.4) 15.09

Charge Density (pH 7.0) 0.0800

GRAVY Index-0.49

Hydrophobic Moment 0.66

Boman Index-0.12

Instability Index33.41

Aliphatic Index 63.21

Aromaticity 0.0518

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4845.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 9042.23

LogP -131.18

H-bond Donors 326.0

H-bond Acceptors 304.0

Rotatable Bonds 703.0

Heavy Atoms 1442.0

Ring Count 19.0

Amide Bonds 213.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0404782 VERIFIED: NO

Provenance & Taxonomy

OrganismBoreogadus saida [Animal]

Familycathelicidin

Structure & Mods

ConfigSingle-chain peptide backbone represented as a linear sequence entry [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial