Peptide Database

Peptide NamePeptide chain B in PDB 4YM4

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length11 amino acids

Chemical FormulaC51H75N11O25S

DescriptionStandard

        MTSFEDADEET
    

Molecular Weight1274.26 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-5.49

Net Charge (pH 7.4) -5.71

Charge Density (pH 7.0) -0.4990

GRAVY Index-1.20

Hydrophobic Moment 0.29

Boman Index-0.17

Instability Index45.90

Aliphatic Index 9.09

Aromaticity 0.0909

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 601.51

LogP -7.44

H-bond Donors 20.0

H-bond Acceptors 21.0

Rotatable Bonds 42.0

Heavy Atoms 88.0

Ring Count 1.0

Amide Bonds 10.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0342619 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 4YM4 receptor chain A

MethodProtein-peptide complex structure