Peptide Database

Peptide NameFa-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length21 amino acids

Chemical FormulaC90H129N25O35S4

DescriptionStandard

        SQYGYCGTTPDYCGQGCQSQC
    

Molecular Weight2249.39 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.58

Net Charge (pH 7.4) -1.85

Charge Density (pH 7.0) -0.0753

GRAVY Index-0.84

Hydrophobic Moment 0.28

Boman Index-0.04

Instability Index22.30

Aliphatic Index 0.00

Aromaticity 0.1429

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4720.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 987.80

LogP -16.03

H-bond Donors 37.0

H-bond Acceptors 38.0

Rotatable Bonds 68.0

Heavy Atoms 154.0

Ring Count 4.0

Amide Bonds 24.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0392082 VERIFIED: YES

Provenance & Taxonomy

OrganismSolanum pennellii [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)