Peptide Database

Peptide NamePeptidoglycan-binding protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length407 amino acids

Chemical FormulaC1948H3097N563O564S11

DescriptionStandard

        MLDLHGISRAAFDLVIAQEVTSPAVYEKKYRCRLECPGEQSGPTGGIGYDFGTQSRAQIQADWGTRVDGGMLRVLCGASGKRGAAAASYCRATRGQVDIPWDVALDVFANHDLPRYLAILERYCPGASRLGPDCKGVLFSIAYNRDAAGFAKPGPRYAEMREIRACVASGDLARIPGLIRSMQRLWPKTSGLYGRRETEARLFEKGLAEHHPEAHAELPHVPPAPEPDVVVHVQTRLRELGYFDAGAIDGQLVPKGRTEAAILAFRHEHDLPLEPGIDDELLAALARAEPRQVSELRKSAAASDLREQGSETIAITDQAKGWAGKLFGSGGTLSIAGVLAWITDKATAVSGAKEAVGGLGIPPQALVWLLATVVVLAIFAGLGVLIWVVAHKIEQKRVADYRVGKNT
    

Molecular Weight43780.58 Da

Isoelectric Point (pI)7.65

Net Charge (pH 7.0)1.37

Net Charge (pH 7.4) 0.45

Charge Density (pH 7.0) 0.0034

GRAVY Index-0.10

Hydrophobic Moment 0.81

Boman Index0.05

Instability Index28.77

Aliphatic Index 92.87

Aromaticity 0.0688

Extinction Coeff. Reduced 54890.00

Extinction Coeff. Oxidized 55265.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0017455 VERIFIED: NO

Provenance & Taxonomy

OrganismBradyrhizobium frederickii [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal