Peptide Database

Peptide NameSerracin-P 23 kDa subunit

Function Ontology

—

Standard StatusStandard

Sequence Length22 amino acids

Chemical FormulaC116H181N31O32

DescriptionStandard

        ALPRQLKYLNLFNDGNNYIGVV
    

Molecular Weight2521.87 Da

Isoelectric Point (pI)8.54

Net Charge (pH 7.0)0.79

Net Charge (pH 7.4) 0.60

Charge Density (pH 7.0) 0.0361

GRAVY Index-0.08

Hydrophobic Moment 0.50

Boman Index0.10

Instability Index15.91

Aliphatic Index 119.55

Aromaticity 0.1364

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1046.76

LogP -8.32

H-bond Donors 34.0

H-bond Acceptors 33.0

Rotatable Bonds 81.0

Heavy Atoms 179.0

Ring Count 4.0

Amide Bonds 26.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0046148 VERIFIED: YES

Provenance & Taxonomy

OrganismPhotorhabdus asymbiotica [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)