Peptide Database

Peptide NamePutative Pyocin colicin protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length644 amino acids

Chemical FormulaC3086H4910N922O967S4

DescriptionStandard

        MAIRKKRQTNLLKDTTTGTVNISHGSSSKPQNTGFFGSSFTNTGSSSRKRRRRRLHARALQAAQAIAEAEAIAQVERQAQEHAQSLARAQHEREQRVKAEETARAHAEAVIRAQAEKEQAYRHTINLLTNSFRIESQDIARHYTTKSASLSESIAQEIGFVDSQRVPHTGQQALDLILHEKAQINYLIAMKSADRDAINNALTASGTGVGNPDSGQYKHFLEAHSNGDANLSHQLHRRWIDAYTQTQQSQLLSQAIALLEERSNQLSTQHAELSHAFRSARETEESVSAKQANTLWKAVAPPALSATTAGIETVQTRAAQLAKEYFVRIASKALTRNAGLALAAYAPTLGDAERPSPVVGTPLSQLNLPETLDLAYVASVGGAIDVPHRLVESTDSERSLTQWTATDGVKLGTKVRVRTFTYNAQNNTYEFIRDGESTPALIWTPIARPADSSTVSPVNPPALPADPGSAVYPVAPELETYPAIDRNDPDDYILVSPIDSGLPDTYLLFKDPRSIPGVASGYGGPVDANWLKDPAKGEGVPIPSSIAEQLRGQKFNSFDGLRRAIWLAVSNDAELSRHIGAANLRELSQHRAPYAPVADSMGKRIKYEIHHKHWISQGGQVYDLDNLIIMTPKEHIDTHRTLKP
    

Molecular Weight70527.86 Da

Isoelectric Point (pI)7.93

Net Charge (pH 7.0)2.60

Net Charge (pH 7.4) 1.07

Charge Density (pH 7.0) 0.0040

GRAVY Index-0.51

Hydrophobic Moment 0.74

Boman Index-0.07

Instability Index47.06

Aliphatic Index 81.35

Aromaticity 0.0590

Extinction Coeff. Reduced 65320.00

Extinction Coeff. Oxidized 65320.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0186062 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas viridiflava [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal