Peptide Database

Peptide NamePsDef1

Function Ontology

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Standard StatusStandard

Sequence Length39 amino acids

Chemical FormulaC182H276N52O56S7

DescriptionStandard

        GYCVSSTNCKNVCRTEGFPTGSCDFHVASRKCYCYKPCP
    

Molecular Weight4312.91 Da

Isoelectric Point (pI)8.56

Net Charge (pH 7.0)2.78

Net Charge (pH 7.4) 2.41

Charge Density (pH 7.0) 0.0712

GRAVY Index-0.40

Hydrophobic Moment 0.44

Boman Index-0.08

Instability Index31.05

Aliphatic Index 24.87

Aromaticity 0.1282

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4845.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1736.37

LogP -22.86

H-bond Donors 68.0

H-bond Acceptors 67.0

Rotatable Bonds 132.0

Heavy Atoms 297.0

Ring Count 9.0

Amide Bonds 40.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0043207 VERIFIED: YES

Provenance & Taxonomy

OrganismAcinetobacter baumannii [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)