Peptide Database

Peptide NamePeptide chain C in PDB 3MYJ

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length9 amino acids

Chemical FormulaC55H74N10O13S

DescriptionStandard

        YMFPNAPYL
    

Molecular Weight1115.30 Da

Isoelectric Point (pI)5.52

Net Charge (pH 7.0)-0.24

Net Charge (pH 7.4) -0.45

Charge Density (pH 7.0) -0.0269

GRAVY Index0.11

Hydrophobic Moment 0.20

Boman Index0.39

Instability Index100.51

Aliphatic Index 54.44

Aromaticity 0.3333

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 362.09

LogP 0.12

H-bond Donors 11.0

H-bond Acceptors 14.0

Rotatable Bonds 28.0

Heavy Atoms 79.0

Ring Count 5.0

Amide Bonds 9.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0156117 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3MYJ receptor chain A

MethodProtein-peptide complex structure