Peptide Database

Peptide NamePDI1_ARATH

Function Ontology

Neurological / Signaling ▸ Signaling peptide

Standard StatusStandard

Sequence Length501 amino acids

Chemical FormulaC2502H3877N629O784S9

DescriptionStandard

        APWCGHCQKLAPILDEVAVSYQSDSSVVIAKLDATANDFPKDTFDVKGFPDDASEVVSDKKVVVVGIFPKLSGSEFDSFMAIAEKLRSELDFAHTSDAKLKDPNNHPYVIKFFESTNTKAMLFINFTGEGAESLKSKYREVATSNKGQGLLLPRGESSVTGPVVRLFKPFDEQFVDSKDFDGEALEKFVKESSIPLITVFDMAMRGFTLFSILVLSLCASSIRSEETETKEFVLTLDHTNFTDTINKHDFIQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLKKQSGPASAEIKSASFLLGDAENSQGAFQYFGLEESQVPLIIIQTADDKKYLKTNVEVDQIESWTIYFKSASGNVVVYEGDRTKEDFISFVDKNKDTVGEPKKEEETTEEVKDEVKDFKDGKIAPHKKSQPIPAENNEPVKVVVSDSLDDIVLNSGKNVLLEFYVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFAT
    

Molecular Weight55600.88 Da

Isoelectric Point (pI)4.81

Net Charge (pH 7.0)-25.53

Net Charge (pH 7.4) -26.34

Charge Density (pH 7.0) -0.0510

GRAVY Index-0.33

Hydrophobic Moment 0.82

Boman Index0.02

Instability Index28.78

Aliphatic Index 79.94

Aromaticity 0.0998

Extinction Coeff. Reduced 35870.00

Extinction Coeff. Oxidized 36120.00

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Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0292986 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis thaliana [Plant]

Tax ID3702

Structure & Mods

Configdisulfide-constrained cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Disulfidedisulfide bond reported, sites not specified

Other ModsGlycosylation reported

Bio-Activity Profile

Function

Signaling