Peptide Database

Peptide NameRecombinant Cy-AMP1, rCy-AMP1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Antimicrobial ▸ Antifungal

Standard StatusStandard

Sequence Length46 amino acids

Chemical FormulaC203H306N54O61S8

DescriptionStandard

        GSKGAPCAKKPCCGPLGHYKVDCSTIPDYPCCSKYGFCGSGPQYCG
    

Molecular Weight4735.45 Da

Isoelectric Point (pI)8.47

Net Charge (pH 7.0)2.76

Net Charge (pH 7.4) 2.38

Charge Density (pH 7.0) 0.0600

GRAVY Index-0.35

Hydrophobic Moment 0.41

Boman Index0.06

Instability Index9.28

Aliphatic Index 27.61

Aromaticity 0.1087

Extinction Coeff. Reduced 5960.00

Extinction Coeff. Oxidized 6460.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1778.62

LogP -22.26

H-bond Donors 67.0

H-bond Acceptors 73.0

Rotatable Bonds 142.0

Heavy Atoms 326.0

Ring Count 12.0

Amide Bonds 46.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0340837 VERIFIED: YES

Provenance & Taxonomy

Organismsynthetic construct [Synthetic]

FamilyCathelicidin

Tax ID32630

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial Antifungal

TargetClavibacter michiganensis subsp. michiganensis NBRC 13763

Activity4 μg/mL

MethodIC50

RECORD: Rec_0356484 VERIFIED: YES